455 CARDS · 41 WEEKS · EVERY SOURCE THE PLAN NAMES
Every video, chapter, paper and repository in the programme, as one card each, with the time it costs and why it is there. Filter by how long you have.
54 cards shown. Stashes: LABLOOP-W00 Notebook (15) LABLOOP-W01 Notebook (18) LABLOOP-W02 Notebook (15) LABLOOP-W03 Notebook (19) LABLOOP-W04 Notebook (17) LABLOOP-W05 Notebook (16) LABLOOP-W06 Notebook (12) LABLOOP-W07 Notebook (12) LABLOOP-W08 Notebook (15) LABLOOP-W09 Notebook (10) LABLOOP-W10 Notebook (11) LABLOOP-W11 Notebook (12) LABLOOP-W12 Notebook (12) LABLOOP-W13 Notebook (13) LABLOOP-W14 Notebook (12) LABLOOP-W15 Notebook (10) LABLOOP-W16 Notebook (14) LABLOOP-W17 Notebook (13) LABLOOP-W18 Notebook (10) LABLOOP-W19 Notebook (10) LABLOOP-W20 Notebook (10) LABLOOP-W21 Notebook (13) LABLOOP-W22 Notebook (10) LABLOOP-W23 Notebook (9) LABLOOP-W24 Notebook (9) LABLOOP-W25 Notebook (12) LABLOOP-W26 Notebook (11) LABLOOP-W27 Notebook (10) LABLOOP-W28 Notebook (6) LABLOOP-W29 Notebook (7) LABLOOP-W30 Notebook (10) LABLOOP-W31 Notebook (8) LABLOOP-W32 Notebook (5) LABLOOP-W33 Notebook (13) LABLOOP-W34 Notebook (12) LABLOOP-W35 Notebook (10) LABLOOP-W36 Notebook (8) LABLOOP-W37 Notebook (7) LABLOOP-W38 Notebook (6) LABLOOP-W39 Notebook (6) LABLOOP-W40 Notebook (6)
Saturday sandbox · after OpenStax Biology 2e, ch. 3 "Biological Macromolecules"
Khan Academy, Energy and enzymes → Activation energy (article) — One article + the practice set. Moved out of core on 2026-09-29
In: LABLOOP-W01 Notebook
Saturday sandbox · after Khan Academy, Energy and enzymes → Activation energy
Crash Course Biology #3 · "Biological Molecules — You Are What You Eat" — youtube.com/watch?v=H8WJ2KENlK0. Moved out of core on 2026-09-29
In: LABLOOP-W01 Notebook
Saturday sandbox · after Crash Course Biology #3 · "Biological Molecules — You Are What You Eat"
Khan Academy (MCAT) · "Enzymes and activation energy" — khanacademy.org/…/v/enzymes-and-activation-energy. Moved out of core on 2026-09-29
In: LABLOOP-W01 Notebook
Saturday sandbox · after Khan Academy (MCAT) · "Enzymes and activation energy"
LearnChemE · "Washout Derivation in CSTR Bioreactor (Bio)" — watch?v=L_bzv0bbU4M. The engineer's version of what happens when the feed stops — which is exactly Friday's injected fault
In: LABLOOP-W01 Notebook
Saturday sandbox · after LearnChemE · "Washout Derivation in CSTR Bioreactor (Bio)"
MIT OCW 18.06 Linear Algebra (Gilbert Strang), lectures 1-3 — ocw.mit.edu/courses/18-06-linear-algebra-spring-2010. Only if 3Blue1Brown leaves you wanting proofs
In: LABLOOP-W01 Notebook
Saturday sandbox · after MIT OCW 18.06 Linear Algebra
NPTEL Bioreactors (Suraishkumar, IIT Madras), lecture 1 — nptel.ac.in/courses/102106053. A preview of week 09. (verify) course numbering
In: LABLOOP-W01 Notebook
Saturday sandbox · after OpenStax Biology 2e, ch. 7 "Cellular Respiration"
3Blue1Brown · Neural Networks, ch. 1-2 — Topic page: 3blue1brown.com/topics/neural-networks. Moved out of core on 2026-09-29
In: LABLOOP-W02 Notebook
Saturday sandbox · after 3Blue1Brown · Neural Networks
Steve Brunton (@Eigensteve) · SVD series, first 3 videos — playlist PLMrJAkhIeNNSVjnsviglFoY2nXildDCcv, overview video watch?v=gXbThCXjZFM. PCA's engine explained by an engineer; you will want this again in weeks 12-17
In: LABLOOP-W02 Notebook
Saturday sandbox · after Deisenroth, Faisal & Ong, Mathematics for Machine Learning, ch. 10 "Dimensionality Reduction wit…
Ninja Nerd · glycolysis and Krebs cycle lectures (long, whiteboard) — channel search by title, only if respiration is still abstract. (verify) no fixed video ID recorded
In: LABLOOP-W02 Notebook
Saturday sandbox
ISLP ch. 2 and 3.1-3.3 — statlearning.com (free PDF) + the matching Stanford Statistical Learning with Python videos. Moved out of core on 2026-09-29
In: LABLOOP-W03 Notebook
Saturday sandbox · after Kourti & MacGregor (1995), "Process analysis, monitoring and diagnosis, using multivariate proje…
Crash Course Statistics (YouTube), episodes on the normal distribution and control charts' ancestor, the z-score
In: LABLOOP-W03 Notebook
Saturday sandbox · after James, Witten, Hastie, Tibshirani & Taylor, An Introduction to Statistical Learning with Applica…
Stanford Online · Statistical Learning with Python (Hastie, Tibshirani et al.) — Playlist: youtube.com/playlist?list=PLoROMvodv4rPP6braWoRt5UCXYZ71GZIQ · course page: online.stanford.edu/courses/sohs-ystatslearningp-statistical-learning-python. Moved out of core on 2026-09-29
In: LABLOOP-W03 Notebook
Saturday sandbox · after Sandve G. et al., "Ten Simple Rules for Reproducible Computational Research", PLOS Comp. Biol. 9…
StatQuest · "Bootstrapping Main Ideas!!!" — Channel: youtube.com/@statquest — search the exact title. (verify): no stable video ID confirmed on 2026-09-15. Moved out of core on 2026-09-29
In: LABLOOP-W04 Notebook
Saturday sandbox · after McHugh (2012), "Interrater reliability: the kappa statistic"
3Blue1Brown "Bayes theorem, the geometry of changing beliefs" (YouTube, 15 min)
In: LABLOOP-W06 Notebook
Saturday sandbox · after Karpathy, "Deep Dive into LLMs like ChatGPT"
Ninja Nerd "Enzyme kinetics" lecture (YouTube) for Michaelis-Menten in depth
In: LABLOOP-W07 Notebook
Saturday sandbox · after Kadlec, Gabrys & Strandt (2009), "Data-driven soft sensors in the process industry"
3Blue1Brown Neural Networks ch. 3-4 ("Backpropagation, intuitively" and "Backpropagation calculus")
In: LABLOOP-W08 Notebook
Saturday sandbox · after Stanford CS231n notes "Backpropagation, intuitions"
Simon Peyton Jones, "How to write a great research paper" (YouTube) — watch now, not in week 18, because the report is a mini-paper
In: LABLOOP-W08 Notebook
Saturday sandbox
MIT OCW 10.37 Chemical and Biological Reaction Engineering (Spring 2007), lecture notes on bioreactors — ocw.mit.edu/courses/10-37-chemical-and-biological-reaction-engineering-spring-2007
In: LABLOOP-W09 Notebook
Saturday sandbox · after Coursera Industrial Biotechnology
LearnChemE "mass balance" screencasts (YouTube)
In: LABLOOP-W09 Notebook
Saturday sandbox · after LearnChemE "mass balance" screencasts
Karpathy "Intro to Large Language Models" (YouTube, 1 h) for a bird's-eye view
In: LABLOOP-W09 Notebook
Saturday sandbox
ritvikmath "Gaussian Processes" (YouTube, whiteboard intuition)
In: LABLOOP-W10 Notebook
Saturday sandbox · after ritvikmath "Gaussian Processes"
In: LABLOOP-W10 Notebook
Saturday sandbox · after NCBI Taxonomy and E-utilities documentation
Brunton "Bayesian optimization" lecture (search in his channel; verify)
In: LABLOOP-W11 Notebook
Saturday sandbox · after arXiv endorsement page
Steve Brunton "Physics Informed Machine Learning" series (YouTube), first 2 videos
In: LABLOOP-W12 Notebook
Saturday sandbox
Steve Brunton "Neural ODEs" (YouTube)
In: LABLOOP-W13 Notebook
Saturday sandbox · after Karniadakis et al. (2021), "Physics-informed machine learning"
Stanford CS197 (cs197.stanford.edu), lecture on "vertical paper structure" (verify lecture title)
In: LABLOOP-W13 Notebook
Saturday sandbox · after ASAPbio preprint FAQ
StatQuest "Statistical Power, Clearly Explained" — reviewers may ask whether 50 gold papers is enough
In: LABLOOP-W15 Notebook
Saturday sandbox · after Rives et al. (2021), "Biological structure and function emerge from scaling unsupervised learnin…
DeepMind, "AlphaFold: The making of a scientific breakthrough" (YouTube, 8 min) — the emotional context of protein AI
In: LABLOOP-W16 Notebook
Saturday sandbox · after DeepMind, "AlphaFold: The making of a scientific breakthrough"
Nobel Prize in Chemistry 2024 lectures (Baker, Hassabis, Jumper) — nobelprize.org
In: LABLOOP-W16 Notebook
Saturday sandbox · after Nobel Prize in Chemistry 2024 lectures
Anastasios Angelopoulos' conformal prediction tutorial videos (YouTube; verify)
In: LABLOOP-W16 Notebook
Saturday sandbox · after Anastasios Angelopoulos' conformal prediction tutorial videos
Valence Labs (YouTube), search "ESM" or "protein language models" in the M2D2 reading group
In: LABLOOP-W16 Notebook
Saturday sandbox
Yang, Wu & Arnold (2019), "Machine-learning-guided directed evolution for protein engineering", Nature Methods 16:687-694. The classic review; read it before week 21
In: LABLOOP-W17 Notebook
Saturday sandbox · after Yang, Wu & Arnold (2019), "Machine-learning-guided directed evolution for protein engineering"
Frances Arnold, Nobel Lecture 2018 "Innovation by Evolution: Bringing New Chemistry to Life" (nobelprize.org)
In: LABLOOP-W17 Notebook
Saturday sandbox · after Rothschild & Mancinelli (2001), "Life in extreme environments"
Stanford CS197, lecture on "writing the paper" (verify title)
In: LABLOOP-W18 Notebook
Saturday sandbox · after Single-cell best practices
MIT 6.874 single-cell lecture (Kellis, YouTube)
In: LABLOOP-W19 Notebook
Saturday sandbox · after Richard Hamming, You and Your Research
Stanford CS197 lecture on research talks and posters (verify title)
In: LABLOOP-W20 Notebook
Saturday sandbox · after Yang, Wu & Arnold
Valence Labs (YouTube) reading-group talks on protein language models
In: LABLOOP-W21 Notebook
Saturday sandbox · after Valence Labs
Frances Arnold on iBiology (directed evolution talks; verify)
In: LABLOOP-W21 Notebook
Saturday sandbox
Cunningham, Causal Inference: The Mixtape — mixtape.scunning.com, ch. 3 (directed acyclic graphs)
In: LABLOOP-W22 Notebook
Saturday sandbox · after Huntington-Klein, The Effect
Coursera A Crash Course in Causality (Penn), week 1
In: LABLOOP-W22 Notebook
Saturday sandbox
UniProt REST API documentation (rest.uniprot.org) and the BRENDA enzyme database (brenda-enzymes.org) for reported temperature optima
In: LABLOOP-W23 Notebook
Saturday sandbox · after UniProt REST API documentation
iBiology talks on extremophiles and enzymes (search; verify)
In: LABLOOP-W23 Notebook
Saturday sandbox · after iBiology talks on extremophiles and enzymes
Crash Course Biology #35 "Old & Odd" (carry over)
In: LABLOOP-W23 Notebook
Saturday sandbox · after Bambi documentation
StatQuest on ANOVA and "Design matrices" (search in channel)
In: LABLOOP-W25 Notebook
Saturday sandbox · after Sprouffske & Wagner
Midani, Collins & Britton (2021), "AMiGA: software for automated analysis of microbial growth assays", mSystems 6:e00508-21 — an open-source Python tool that fits growth curves without assuming their shape (pip install amiga)
In: LABLOOP-W26 Notebook
Saturday sandbox · after NCATS Assay Guidance Manual
In: LABLOOP-W26 Notebook
Saturday sandbox
David Maister, Charles Green & Robert Galford, The Trusted Advisor (book, paid) — the trust equation
In: LABLOOP-W27 Notebook
Saturday sandbox · after Alan Weiss, Value-Based Fees
Stanford eCorner (ecorner.stanford.edu) — search talks on "customer discovery" and "B2B sales for technical founders"
In: LABLOOP-W27 Notebook
Saturday sandbox
Getting to Yes (Fisher, Ury & Patton; book, paid) — principled negotiation, if price is contested
In: LABLOOP-W28 Notebook
Saturday sandbox · after Getting to Yes
Stanford eCorner talks on first customers (search)
In: LABLOOP-W28 Notebook
Saturday sandbox · after Target journal author guidelines chosen with the partner
Stanford CS197 lecture on co-authoring and feedback (verify)
In: LABLOOP-W31 Notebook
Saturday sandbox · after Chip Huyen, Designing Machine Learning Systems
The Trusted Advisor (carry over) for running a pilot relationship
In: LABLOOP-W37 Notebook
Saturday sandbox
Nancy Duarte, "The secret structure of great talks" (TEDx, YouTube)
In: LABLOOP-W38 Notebook
Saturday sandbox
Uri Alon's talk and essay on "the cloud" in research (iBiology; verify)
In: LABLOOP-W40 Notebook