scverse/scanpy
PBMC 3k tutorial notebook (in the docs; scverse/scanpy-tutorials is archived, ★ 242) in Colab
In: LABLOOP-W19 Notebook
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theislab/single-cell-best-practices
Run the quality-control notebook on the same data; compare cell counts after filtering
In: LABLOOP-W19 Notebook
scipy/scipy
scipy.stats.bootstrap on your key metrics; replace every naked number in both papers
In: LABLOOP-W19 Notebook