py-why/dowhy
Run the "getting started" notebook; draw a DAG for "organism growth temperature → sequence composition → Tm" to see where confounding lives
In: LABLOOP-W22 Notebook
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scikit-learn/scikit-learn
GroupKFold / StratifiedGroupKFold with sequence-cluster IDs
In: LABLOOP-W22 Notebook
scikit-learn-contrib/MAPIE
Conformal intervals on the grouped folds; report coverage per fold
In: LABLOOP-W22 Notebook
soedinglab/MMseqs2
mmseqs easy-cluster on Meltome FASTA at 30% identity; save cluster TSV
In: LABLOOP-W22 Notebook