The Turing Way, chapter on "Version control" and "Research compendia"
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In: LABLOOP-W04 Notebook
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OpenStax Microbiology, ch. 8 "Microbial Metabolism"
Saturday sandbox · after The Turing Way, chapter on "Version control" and "Research compendia"
OpenStax Microbiology, ch. 8 "Microbial Metabolism", sections 8.1-8.4 — start at 8.1 Energy, Matter, and Enzymes, chapter entry 8-introduction, recap 8-summary — 8.1 through 8.4; pay attention to aerobic vs anaerobic. Moved out of core on 2026-09-29
In: LABLOOP-W04 Notebook
ISLP ch. 5 "Resampling Methods"
Saturday sandbox · after OpenStax Microbiology, ch. 8 "Microbial Metabolism"
ISLP ch. 5 "Resampling Methods" — free PDF at statlearning.com — 5.1 cross-validation and 5.2 bootstrap; then the ch. 5 lab. Moved out of core on 2026-09-29
In: LABLOOP-W04 Notebook
Sandve G. et al., "Ten Simple Rules for Reproducible Computational Research", PLOS Comp. Biol. 9…
Saturday sandbox · after ISLP ch. 5 "Resampling Methods"
Sandve G. et al., "Ten Simple Rules for Reproducible Computational Research", PLOS Comp. Biol. 9(10):e1003285, 2013. DOI 10.1371/journal.pcbi.1003285 — All ten rules, they are one page each. Moved out of core on 2026-09-29
In: LABLOOP-W04 Notebook
StatQuest · "Bootstrapping Main Ideas!!!"
Saturday sandbox · after Sandve G. et al., "Ten Simple Rules for Reproducible Computational Research", PLOS Comp. Biol. 9…
StatQuest · "Bootstrapping Main Ideas!!!" — Channel: youtube.com/@statquest — search the exact title. (verify): no stable video ID confirmed on 2026-09-15. Moved out of core on 2026-09-29
In: LABLOOP-W04 Notebook
The Turing Way — book.the-turing-way.org, chapters on "Version control"
Saturday sandbox · after StatQuest · "Bootstrapping Main Ideas!!!"
The Turing Way — book.the-turing-way.org, chapters on "Version control" and "Research compendia". The grown-up version of what you shipped this week
In: LABLOOP-W04 Notebook
carpentries-lab/good-enough-practices
Saturday sandbox · after The Turing Way — book.the-turing-way.org, chapters on "Version control"
carpentries-lab/good-enough-practices — the hands-on lesson behind week 00's R3
In: LABLOOP-W04 Notebook
Zenodo help
Saturday sandbox · after carpentries-lab/good-enough-practices
Zenodo help — versioning and GitHub integration, if the DOI badge misbehaves
In: LABLOOP-W04 Notebook
JOSS submission guidance
Saturday sandbox · after Zenodo help
JOSS submission guidance — you submit in week 36, not now. Read it once so that today's release history is already the kind reviewers want
In: LABLOOP-W04 Notebook